In choosing the right accounting software program for e-commerce companies, I like to recommend one that may sync transactions between the e-commerce platform and accounting software program, observe multi-channel gross sales, reconcile funds, deal with gross sales tax, and automate COGS and returns for correct reporting. With that in thoughts, listed below are the software program that made it to my listing:
Acumatica Cloud ERP
Staff per Firm Measurement
Micro (0-49), Small (50-249), Medium (250-999), Massive (1,000-4,999), Enterprise (5,000+)
Any Firm Measurement
Any Firm Measurement
Options
Accounts Receivable/Payable, API, Departmental Accounting, and extra
QuickBooks
Staff per Firm Measurement
Micro (0-49), Small (50-249), Medium (250-999), Massive (1,000-4,999), Enterprise (5,000+)
Micro (0-49 Staff), Small (50-249 Staff), Medium (250-999 Staff), Massive (1,000-4,999 Staff)
Micro, Small, Medium, Massive
Options
API, Normal Ledger, Stock Administration
Quicken Enterprise & Private
Staff per Firm Measurement
Micro (0-49), Small (50-249), Medium (250-999), Massive (1,000-4,999), Enterprise (5,000+)
Micro (0-49 Staff)
Micro
Options
Accounts Receivable/Payable, Invoicing / Billing, Cell Capabilities, and extra
Fast comparability of the very best accounting software program for e-commerce
| QuickBooks Online | ||||
| Xero | ||||
| Zoho Books | ||||
| Sage Intacct | ||||
| Wave | ||||
| Score: 5 (Wonderful); 4 (Very Good); 3 (Good); 2 (Honest); 1 (Poor). For an in depth rationalization, examine my methodology beneath. | ||||
QuickBooks On-line: Greatest total
My ranking: 4.4 out of 5
QuickBooks On-line leads my roundup of the very best e-commerce accounting software program, primarily as a result of it gives direct integrations with Shopify and BigCommerce. Whereas platforms like Amazon, eBay, and Squarespace lack native QuickBooks connections, they sync seamlessly by third-party connectors like A2X, Zapier, and Webgility — all of which combine effectively with QuickBooks On-line.
Past its highly effective options, QuickBooks is extensively used throughout the US. This makes it a really perfect alternative when you’re seeking to outsource bookkeeping to impartial CPAs or companies specializing in e-commerce accounting.
Pricing
- Easy Begin: $35 per 30 days for one seat
- Necessities: $65 per 30 days for 2 customers
- Plus: $99 per 30 days for 5 seats
- Superior: $235 per 30 days for 25 customers
You’ll be able to strive QuickBooks On-line free for 30 days or get a 50% low cost for 3 months when you enroll immediately.
My analysis
QuickBooks On-line earns excessive marks for each accounting and e-commerce performance. Its energy in accounting is anticipated, given its versatility, however what stands out is its e-commerce adaptability. Whereas not an e-commerce platform itself, QuickBooks On-line integrates immediately and by way of third-party apps with main e-commerce platforms. The built-in Mailchimp integration inside Intuit additionally makes deserted cart e mail automation seamless.
Furthermore, it did effectively in ecommerce options on account of its robust integrations and automation however misplaced factors for missing built-in deserted cart monitoring and superior market reporting. Whereas it syncs with Shopify, Amazon, and eBay, multi-channel sellers may have third-party apps like A2X for detailed income attribution and reconciliation. Regardless of this, it stays a best choice for small or midsize companies.
The principle downside of QuickBooks On-line is scalability, because it limits the variety of seats to a most of 25. In the event you want extra customers, Xero is likely to be the higher possibility. However when you want extra seats and have outgrown QuickBooks, I extremely advocate Sage Intacct.
Learn our QuickBooks On-line overview
Execs and cons
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Xero: Greatest for rising corporations with multicurrency wants
My ranking: 4.2 out of 5
Xero is my decide for rising corporations as a result of it supplies limitless seats in all plans. On prime of that, it gives excellent options in multicurrency transactions, making it a fantastic decide for e-commerce companies with worldwide transactions.
It additionally integrates with Shopify, Amazon, WooCommerce, BigCommerce, and extra by way of third-party apps like A2X, Webgility, and Synder. These integrations automate gross sales knowledge syncing, tax calculations, and COGS monitoring. Its financial institution feeds and computerized reconciliation streamline cost processing from Stripe, PayPal, and different gateways, lowering handbook work.
Pricing
- Early: $20 per 30 days (restricted to twenty invoices and 5 payments)
- Rising: $47 per 30 days
- Established: $80 per 30 days
Get 90% off for 3 months while you enroll, or strive a plan for 30 days and pay the common fee after the trial.
My analysis
Xero goes head-to-head with QuickBooks On-line however stands out for scalability and world e-commerce help. Not like QuickBooks, it permits limitless customers, making it best for rising companies needing entry for accountants, finance groups, and e-commerce managers.
One other key benefit is its multicurrency help. It robotically converts transactions in over 160 currencies with real-time change charges, which is crucial for worldwide gross sales on platforms like Amazon, Shopify, and eBay.
Nevertheless, Xero didn’t rating as excessive in e-commerce options as a result of its integration choices and reporting capabilities aren’t as polished. The platform’s editor lacks flexibility, making it irritating to customise stories or streamline workflows for e-commerce companies. Moreover, Xero is much less standard within the US, the place QuickBooks On-line dominates the market. Many US CPAs and bookkeepers are QuickBooks ProAdvisors, making QuickBooks On-line best for companies desirous to outsource their bookkeeping.
Learn our overview of Xero
Execs and cons
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Zoho Books: Greatest for automation and customization
My ranking: 4.1 out of 5
Zoho Books is tightly built-in throughout the Zoho ecosystem, making it a fantastic alternative for e-commerce companies utilizing Zoho Commerce, Zoho CRM, or Zoho Stock. Its built-in automation reduces handbook work and seamless knowledge syncing retains financials up to date throughout platforms.
With a number of integrations throughout the Zoho atmosphere, it offers companies centralized management over gross sales, accounting, and stock. Options like automated invoicing, tax monitoring, and order administration simplify e-commerce operations. Although it lacks direct Amazon or eBay integrations, instruments like Zapier and Zoho Circulation assist bridge the hole, making it a versatile and automation-friendly possibility for e-commerce sellers.
Pricing
- Free: For one person solely
- Commonplace: $15 per 30 days for 3 seats
- Skilled: $40 per 30 days for 5 customers
- Premium: $60 per 30 days for 10 seats
- Elite: $120 per 30 days for 10 customers
- Final: $240 per 30 days for 15 seats
Further seats value $11 per person, per 30 days.
My analysis
Zoho Books earns a excessive mark in accounting options — no surprises there. Nevertheless, its e-commerce options took successful as a result of lack of direct integrations with main e-commerce platforms. Whereas Zoho Books integrates with Zoho Commerce, that isn’t a main platform in my analysis, although I nonetheless awarded additional factors for it.
What really units Zoho Books aside, although, is its excellent buyer help, which outperformed many rivals. You’ll be able to contact the workforce by way of telephone, e mail, and stay chat, whereas an intensive data base is obtainable for fast solutions.
Although Zoho Books gives integrations with different Zoho apps, there’s lots of competitors available in the market which will steer you away from Zoho’s different choices. If in case you have no plans to remain throughout the Zoho app ecosystem, I like to recommend going with Xero as a result of it supplies extra flexibility with third-party integrations, stronger multi-currency help, and limitless person entry.
Learn our Zoho Books overview
Execs and cons
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Sage Intacct: Greatest for multi-entity corporations
My ranking: 3.9 out of 5
Sage Intacct is a strong decide if your organization manages a number of organizations. Due to its built-in consolidation options, Sage Intacct makes accounting for intercompany transactions straightforward. It automates eliminations, multi-entity reporting, and foreign money conversions, lowering the handbook work sometimes required for consolidated financials.
Past its energy in multi-entity administration, Sage Intacct additionally excels in superior monetary reporting, providing customizable dashboards and deep analytics for e-commerce companies dealing with excessive transaction volumes. Its automation capabilities lengthen to stock monitoring, order administration, and income recognition, making it well-suited for large-scale e-commerce operations.
Pricing
Contact Sage for a customized quote.
My analysis
General, Sage Intacct carried out effectively. It’s the one supplier that aced my evaluation of accounting options, excelling in income administration and multi-entity accounting. That makes it a powerful alternative for e-commerce companies needing superior monetary instruments.
It scored decrease in e-commerce options on account of its lack of direct integrations with Shopify, Amazon, and eBay, counting on third-party connectors that add complexity and value. It additionally lacks native deserted cart monitoring and multi-channel income attribution, requiring extra software program to fill these gaps. Whereas its automation and reporting are robust, the absence of built-in e-commerce instruments makes it much less best for sellers needing seamless platform connectivity.
Furthermore, it solely scored solely above common in ease of use, primarily on account of restricted bookkeeping help within the US. Whereas Sage Advisors can be found, the community isn’t as widespread as QuickBooks ProAdvisors, which nonetheless dominates the market.
Learn our overview of Sage
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Wave: Greatest for brand new e-commerce sellers
My ranking: 3.3 out of 5
In the event you’re simply beginning your e-commerce retailer and have fewer gross sales, Wave is the proper easy accounting resolution for monitoring e-commerce earnings and bills. Because it’s free, it’s best for companies wanting to maintain prices low whereas managing fundamental bookkeeping. In the event you’re an e-commerce vendor who sells part-time and has no plan of scaling up, selecting Wave is a cheap possibility.
Pricing
- Starter: Free for one person
- Professional: $16 for limitless customers
My analysis
Wave has a “glass ceiling” by way of capabilities and long-term use. It gives easy accounting options that work for small e-commerce shops or informal sellers. Nevertheless, it lacks built-in COGS monitoring, which could be difficult for companies dealing with excessive gross sales volumes. For smaller shops, monitoring COGS manually in a spreadsheet should still be manageable.
The platform additionally has restricted e-commerce integrations, so don’t count on automated stock syncing, multi-channel income monitoring, or superior gross sales tax automation. If you wish to keep free however have the choice to improve and scale, I like to recommend choosing Zoho Books. Its free tier is nice for informal e-commerce.
Learn our Wave overview
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How I evaluated the very best e-commerce accounting software program
I used a rubric to guage the 5 finest accounting software program for e-commerce companies.
Pricing (10% of total rating)
This breaks down the true value and worth of accounting software program, guaranteeing you get worth for cash. The bottom subscription and extra person prices are measured towards affordability, with greater scores awarded to a program that retains pricing affordable. Moreover, the features-to-cost ratio reveals whether or not a software’s price ticket is justified by its capabilities, rewarding those who ship robust performance with out inflating prices.
Accounting options (40% of total rating)
My evaluation focuses on core accounting capabilities, together with transaction administration, monetary reporting, and automation. I overview how effectively the software program helps e-commerce companies, significantly in areas like tax compliance, stock monitoring, and multi-entity accounting. Usability, customization, and scalability are additionally key elements, guaranteeing the software meets the wants of rising companies.
E-commerce options (20% of total rating)
This focuses on platform integrations, cost reconciliation, and transaction automation to make sure seamless monetary monitoring. I study how effectively the software program handles deserted cart monitoring, income attribution, and returns administration, serving to you optimize gross sales and profitability. Moreover, I contemplate multi-channel gross sales help and reporting accuracy, guaranteeing you may observe efficiency throughout completely different platforms and advertising and marketing sources.
Ease of use and help (20% of total rating)
I consider usability, help, and accessibility, guaranteeing you may effectively handle accounting processes. I additionally overview bookkeeping help, dashboard navigation, and studying curve, specializing in how intuitive the software program is and the way simply you may arrange and combine e-commerce platforms. Moreover, I study buyer help high quality, together with response occasions, obtainable assets, and the accessibility of licensed bookkeeping professionals.
Person critiques (10% of total rating)
I additionally take person suggestions from G2 and Capterra into consideration. I take advantage of the weighted common scores of these two overview websites as a foundation for the person overview rating.
Rankings
I gave the next base scores to attain software program.
- Wonderful (5): The characteristic is absolutely developed, extremely automated, and seamless. It requires little or no handbook effort, integrates easily with different programs, and consists of superior capabilities that enhance effectivity or present additional worth past fundamental expectations.
- Very Good (4): The characteristic is well-designed and efficient however has minor limitations which will require occasional skilled changes. It really works reliably and consists of most anticipated performance however could lack some refinements or superior settings.
- Good (3): The characteristic meets fundamental necessities however has noticeable gaps that would influence usability. It features as anticipated however requires some handbook work or skilled enter to function effectively. It’s usable however not the very best in its class.
- Honest (2): The characteristic exists however is underdeveloped or lacks key features. It might be tough to make use of, require frequent workarounds, or rely closely on skilled tweaks to carry out important duties. It’s purposeful however irritating or incomplete.
- Poor (1): The characteristic is barely usable, unreliable, or doesn’t carry out as supposed. It might have important limitations, have frequent errors, or lack key integrations, making it impractical for real-world use.
- N/A (0): The characteristic is totally lacking from the software program, that means customers should depend on third-party options, workarounds, or handbook processes to compensate for its absence.
Along with the bottom ranking, I utilized skilled changes, including 0.1 to 0.5 factors primarily based on key strengths or enhancements that enhance performance. These changes fine-tune the scores to replicate usability, effectivity, and concord if mixed with different options.
Ceaselessly requested questions (FAQs)
Is QuickBooks good for an e-commerce enterprise?
Sure, it’s. It integrates with Shopify, Amazon, eBay, and different platforms, automates gross sales tax monitoring, and simplifies COGS monitoring, multi-channel income reporting, and cost reconciliation. Its third-party app market additionally expands performance for stock administration and superior analytics.
Which accounting software program is finest for Shopify?
QuickBooks On-line, Xero, and Zoho Books are prime decisions for Shopify, relying on enterprise measurement and desires. QuickBooks On-line gives direct integration, automated gross sales monitoring, and robust monetary reporting. In the meantime, Xero is perfect for multicurrency help and automation, whereas Zoho Books is good for companies already utilizing Zoho’s ecosystem and needing affordability with automation.
What’s the finest accounting software program for Amazon sellers?
QuickBooks On-line, Xero, and Sage Intacct stand out. QuickBooks On-line integrates with Amazon Vendor Central by way of apps like A2X, making gross sales reconciliation and COGS monitoring seamless, whereas Xero is a powerful different with multicurrency help and automatic financial institution feeds. Sage Intacct is good for high-volume Amazon sellers needing superior stock administration and multi-entity accounting.